Post by Nadica (She/Her) on Aug 6, 2024 23:22:38 GMT
Potential KS.1.1/KP.3.3 recombinant - Published Aug 6, 2024
Mutations based on JN.1: C18657T, C19716T, C21627A, T21738C, T22928C, C23039G, G24872T, C25006T, C28291A, G28884C
The 5' donor could be from a pre-C6701T KS.1.1 branch with C18657T.
Breakpoint: 21738~22599
Query: C18657T, C19716T, C25006T
Earliest sequence: 06-24 Berlin, Germany EPI_ISL_19283881
Latest sequence: 07-19 Berlin, Germany EPI_ISL_19300184
Regions detected: Germany 11, France 1, Netherlands 1, South Korea 1, UK 1
nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_592af_f5e730.json?f_userOrOld=uploaded%20sample
Mutations based on JN.1: C18657T, C19716T, C21627A, T21738C, T22928C, C23039G, G24872T, C25006T, C28291A, G28884C
The 5' donor could be from a pre-C6701T KS.1.1 branch with C18657T.
Breakpoint: 21738~22599
Query: C18657T, C19716T, C25006T
Earliest sequence: 06-24 Berlin, Germany EPI_ISL_19283881
Latest sequence: 07-19 Berlin, Germany EPI_ISL_19300184
Regions detected: Germany 11, France 1, Netherlands 1, South Korea 1, UK 1
nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_592af_f5e730.json?f_userOrOld=uploaded%20sample